Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs11810311 | chr1:27980011 | A/G | 0.000182 | 214 | 10.83 | 11.17 | 16.5 | KM Plot |
| KIRP | rs11812529 | chr10:63427373 | C/T | 0 | 211 | 18.03 | 9 | 1.17 | KM Plot |
| KIRP | rs11812557 | chr10:63427441 | G/A | 0 | 211 | 18.03 | 9 | 1.17 | KM Plot |
| KIRP | rs11812959 | chr10:63373259 | G/A | 0 | 212 | 18.25 | 9 | 1.17 | KM Plot |
| KIRP | rs11814371 | chr10:63411187 | C/T | 0 | 206 | 18.87 | 5.57 | 3.93 | KM Plot |
| KIRP | rs118146173 | chr17:80729377 | C/T | 8.85E-5 | 209 | 15.88 | 18 | 15.15 | KM Plot |
| KIRP | rs11815013 | chr10:70703896 | C/T | 8.07E-9 | 213 | 15.07 | 16.97 | 10.6 | KM Plot |
| KIRP | rs11815699 | chr10:63426226 | A/G | 0 | 211 | 18.03 | 9 | 1.17 | KM Plot |
| KIRP | rs11816057 | chr10:63518705 | T/C | 0 | 214 | 17.57 | 10.3 | 2.13 | KM Plot |
| KIRP | rs11816281 | chr10:63427379 | A/T | 0 | 211 | 18.03 | 9 | 1.17 | KM Plot |
| KIRP | rs11817812 | chr10:63487986 | A/G | 0 | 213 | 18.25 | 6.83 | 3.38 | KM Plot |
| KIRP | rs11819648 | chr10:63426171 | G/T | 0 | 211 | 18.25 | 6.2 | 1.17 | KM Plot |
| KIRP | rs11844346 | chr14:42922239 | A/T | 4.72E-7 | 214 | 15.33 | 17.03 | 4.97 | KM Plot |
| KIRP | rs11850986 | chr14:96058978 | C/A | 9.82E-7 | 210 | 14.83 | 26.57 | 9.77 | KM Plot |
| KIRP | rs11859961 | chr16:20439199 | G/A | 0.000356 | 213 | 15.88 | 16.72 | 1.73 | KM Plot |